James,
I think you understand the issue exactly. The problem is not so much a problem with Judge Moore's opinion, but a fundamental problem in enablement jurisprudence:
1. Patent claims typically recite comprising, meaning that they can read on things that include much, much more than what is "explicitly recited" in the claim.
2. Patent law requires you to enable the full scope of the claim, although earlier decisions indicated that you only needed to provide detailed descriptions of one embodiment.
2a. The CAFC has recently back off from the "one embodiment" rule and started to require more detailed description for multiple embodiments, in order to enable the claim.
3. But, because comprising claims have huge (potentially infinite scope) it is practically impossible to enable the full scope of the claim.
Judge Moore hints at an answer to this riddle when she writes you don't have enable features that aren't explicitly recited. Of course, features that aren't recited are still part of the full scope of comprising claims. So it seems that you don't have to enable the full scope of the claim (in practice).
There's another possible distinction to think about here too: whether the non-recited feature is functionally integrated with the recited features. Consider a claim that recites "comprising A and B." Consider an item that includes A, B, and C. There are two possibilities. First, C can be entirely unrelated to A and B - they are merely connected to each other. In that case, Judge Moore's point makes more sense: it is probably good policy to not require the patentee to enable C in order to enable the claim.
But there is another possibility: C can be functionally integrated with A and B. In fact, C can mean: performing A and B through the functionality of C. In that case, Judge Moore's point makes more sense. Suppose that an accused infringer makes the item of A, B, and C, but the patentee has not enabled doing A and B through C. It seems to me that the patentee did not enable the full scope of the claim - and it becomes questionable whether it is fair to stop others from doing A and B through C. This seems to violate the bargain of patent law, that you get what you made, because the patentee didn't really make doing A and B through C.
As another alternative, if the use of C to do A and B is new and nonobvious, you can invoke the doctrine of blocking patents: the original patentee gets a patent, but the accused infringer can also get a patent on A, B, and C. If they want to do A, B, and C, they would need to cross license.
I do not know of much scholarship on this issue, although there was a great lecture on the subject at my old law firm by a professor/litigator from (I believe) the University of Minnesota.
But I bet you can find some good scholarship on the issue by searching SSRN for "enablement":
Heightened Enablement in the Unpredictable Arts
UCLA Law Review, Vol. 56, p. 127, 2008
Sean B. Seymore
Vanderbilt Law School
Date Posted: March 10, 2008
Last Revised: November 6, 2008
Accepted Paper Series
157 downloads
3 Incl. Electronic Paper The Enablement Pendulum Swings Back
Northwestern Journal of Technology and Intellectual Property, Vol. 6, p. 283, 2008, Washington & Lee Legal Studies Paper No. 2008-40
Sean B. Seymore
Vanderbilt Law School
Date Posted: May 12, 2008
Last Revised: November 6, 2008
Accepted Paper Series
96 downloads
4 Incl. Electronic Paper Rethinking Enablement in the Predictable Arts: Fully Scoping the New Rule
Stanford Technology Law Review, Vol. 3, 2009
Bernard H. Chao
University of Denver Sturm College of Law
Date Posted: March 30, 2009
Last Revised: April 1, 2009
Accepted Paper Series
46 downloads
5 Incl. Electronic Paper The Formal Structure of Patent Law and the Limits of Enablement
Berkley Technology Law Journal, Forthcoming
Jeffrey A. Lefstin
University of California - Hastings College of the Law
Date Posted: April 9, 2008
Last Revised: November 24, 2008
Working Paper Series
90 downloads
Relatedness.